PREDICT Publications

Rhesus macaque in Nepal

PREDICT Publications

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Articles in peer-reviewed journals


T. Goldstein, S.J. Anthony, A. Gbakima, B.H. Bird, J. Bangura, A. Tremeau-Bravard, M.N. Belaganahalli, H.L. Wells, J.K. Dhanota, E. Liang, M. Grodus, R.K. Jangra, V.A. DeJesus, G. Lasso, B.R. Smith, A. Jambai, B.O. Kamara, S. Kamara, W. Bangura, C. Monagin, S. Shapira, C.K. Johnson, K. Saylors, E.M. Rubin, K. Chandran, W.I. Lipkin and J.A.K. Mazet. 2018. The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses Nature Microbiology. doi: 10.1038/s41564-018-0227-2 (Read our news summary)

T. Smiley Evans, L. Tutaryebwa, K.V. Gilardi, P.A. Barry, A. Marzi, M. Eberhart, B. Ssebide, M.R. Cranfield, O. Mugisha, E. Mugisha, S. Kellermann, J.A.K. Mazet, C.K. Johnson. 2018. Suspected Exposure to Filoviruses Among People Contacting Wildlife in Southwestern Uganda. The Journal of Infectious Diseases. doi: 10.1093/infdis/jiy251 (Read our news summary)

D. Carroll, P. Daszak, N.D. Wolfe, G.F. Gao, C.M. Morel, S. Morzaria, A. Pablos-Méndez, O. Tomori, J.A.K. Mazet. 2018. The Global Virome Project.Science, 359(6378):872-4. doi: 10.1126/science.aap7463

P.Zhou, H.Fan,T.Lan,X.L. Yan, W.F. Shi, W.Zhang, Y.Zhu, Y.W.Zhang et al. 2018. Fatal swine acute diarrhoea syndrome caused by an HKU2-related coronavirus of bat origin. Nature. doi: 10.1038/s41586-018-0010-9.

S.Altizer, D.J.Becker, J.H.Epstein, K.M.Forbes, T.R.Gillespie, R.J.Hall, D.M.Hawley , S.M.Hernandez, L.B.Martin, R.K.Plowright, D.A.Satterfield.2018.Food for contagion: synthesis and future directions for studying host–parasite responses to resource shifts in anthropogenic environments.Philosophical Transactions of the Royal Society B, 373(1745). doi: 10.1098/rstb.2017.0102

N.Wang, S.Y.Li, X.L.Yang, H.M.Huang, Y.J.Zhang, H.Guo, C.M.Luo, M.Miller, G.Zhu, A.A.Chmura, E.Hagan, J.H.Zhou,Y.Z.Zhang, L.F. Wang, P.Daszak, Z.L.Shi. 2018. Serological evidence of bat SARS-related coronavirus infection in humans, China. Virologica Sinica,33(1).doi: 10.1007/s12250-018-0012-7

D. Carroll, B. Watson, E. Togami, P. Daszak, J.A.K. Mazet, C.J. Chrisman, E.M. Rubin, N. Wolfe, C.M. Morel, G.F. Gao, G. L. Burci, K. Fukuda, P. Auewarakul & O. Tomori.2018.Building a global atlas of zoonotic diseases. Bulletin of the World Health Organization.doi: 10.2471/BLT.17.205005.

M.K.Rostal, N.Ross, C.Machalaba, C.Cordel, W.B.Karesh.2018.Benefits of a one health approach: An example using Rift Valley fever.One Health. doi:10.1016/j.onehlt.2018.01.001

C. Kumakamba, I. Ngay Lukusa, P. Mbala Kingebeni, F. N’Kawa, J. Atibu Losoma, P.M. Mulembakani, M. Makuwa, J.J. Muyembe Tamfum, R. Belais, A. Gillis, S. Harris, A.W. Rimoin, N.A. Hoff, J.N. Fair, C. Monagin, J. Ayukekbong, E.M. Rubin, N.D. Wolfe, C.E. Lange.2018.DNA indicative of human bocaviruses detected in non-human primates in the Democratic Republic of the Congo.Journal of General Virology.doi: 10.1099/jgv.0.001048

D. Schar, C.M.Machalaba, G. Yamey, W.B. Karesh.2018. A framework for stimulating economic investments to prevent emerging diseases. Bulletin of the World Health Organization,96(2):138.doi:10.2471/BLT.17.199547

F. Legall, C.M. Machalaba, W.B. Karesh, et al.2018. Operational framework for strengthening human, animal and environmental public health systems at their interface. World Bank Report.

A. Islam, J.H. Epstein, M.K. Rostal, S. Islam, M.Z.Rahman, M.E.Hossain, M.S. Uzzaman, V.J. Munster, M. Peiris, M.S. Flora, M. Rahman, and P. Daszak.2018.Middle East Respiratory Syndrome Coronavirus Antibodies in Dromedary Camels, Bangladesh.Emerging Infectious Disease. doi:10.3201/eid2405.171192


B.H. Bird, J.A.K. Mazet.2017. Detection of Emerging Zoonotic Pathogens: An Integrated One Health Approach. Annual Review of Animal Biosciences, 6:121-139. doi: 10.1146/annurev-animal-030117-014628

A. Chaiyes, P. Duengkae, S. Wacharapluesadee, N. Pongpattananurak, K.J. Olival, T. Hemachudha.2017.Assessing the distribution, roosting site characteristics, and population of Pteropus lylei in Thailand.Raffles Bulletin of Zoology.

E. Aysanoa, P. Mayor, P. Mendoza, E.A. Morales, J.G. Perez, M. Bowler, C. Gonzalez, J.A. Ventocilla, G.C. Baldeviano, A.G. Lescano.2017.Molecular Epidemiology of Trypanosomatids and Trypanosoma cruzi in Primates from Peru.EcoHealth.doi:10.1007/s10393-017-1271-8

A. Lacroix, V. Duong, V. Hul, S. San, H. Davun, K. Omaliss, S. Chea, A. Hassanin, W. Theppangna, S.H. Silithammavong, K. Khammavong, S. Singhalath, Z.Greatorex, A.E. Fine, T. Goldstein, S. Olson, D.O. Joly, L. Keatts, P. Dussart, A. Afelt, R. Frutos, P. Buchy.2017.Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia.Infection, Genetics and Evolution. doi: 10.1016/j.meegid.2016.11.029

C.M.Machalaba, K.S. SMith, W.B. Karesh, et al.2017.One Health Economics to confront disease threats.Transactions of the Royal Society of Tropical Medicine and Hygiene.doi:10.1093/trstmh/trx039

A. Willoughby,K. Phelps, PREDICT Consortium, K.J. Olival.2017.A comparative analysis of viral richness and viral sharing in cave-roosting bats.Diversity. doi: 10.3390/d9030035

A.G. Huff, T. Allen, F. Williams, L. Hunter, Z. Gold, L.C. Madoff, W.B. Karesh.2017. Biosurveillance: A systematic review of global infectious disease surveillance systems from 1900 to 2016.Revue scientifique et technique-Office International des Epizooties (OIE).doi: 10.20506/rst.36.2.2670

C. Machalaba & W.B. Karesh.2017.Emerging infectious disease risk: Shared drivers with environmental change.Revue scientifique et technique-Office International des Epizooties (OIE).doi: 10.20506/rst.36.2.2664

J.H. Epstein & S.J. Anthony.2017.Viral discovery as a tool for pandemic preparedness.Revue scientifique et technique-Office International des Epizooties (OIE). doi: 10.20506/rst.36.2.2669

T. Allen, K.A. Murray, C. Zambrana-Torrelio, S.S. Morse, C. Rondinini, M. Di Marco, K.J. Olival, P. Daszak.2017.Global hotspots and correlates of emerging zoonotic diseases.Nature Communications. doi: 10.1038/s41467-017-00923-8.

K.J. Olival, P. Hosseini, C. Zambrana-Torrelio, N. Ross, T. Bogich, P. Daszak.2017. Host and viral traits predict spillover from mammals.Nature.doi: 10.1038/nature22975

T. R. Kelly, W. B. Karesh, C. K. Johnson, K. V.Gilardi, S. J. Anthony, T. Goldstein, PREDICT Consortium and Jonna A.K. Mazet. 2017. One Health proof of concept: Bringing a transdisciplinary approach to surveillance for zoonotic viruses at the human-wild animal interface. Preventive Veterinary Medicine, 137, 112-118. doi:10.1016/j.prevetmed.2016.11.023

S.J. Anthony, C.K. Johnson, D.J. Greig, S. Kramer, X. Che, H. Wells, A.L. Hicks, D.O. Joly, N.D. Wolfe, P. Daszak, W. Karesh, W.I. Lipkin, S.S. Morse, PREDICT Consortium, J.A.K. Mazet, T. Goldstein. 2017. Global patterns in coronavirus diversity. Virus Evolution, 3(1), Vex012. doi: 10.1093/ve/vex012

S.E. Baum, C. Machalaba, P. Daszak, R.H. Salerno, W.B. Karesh. Evaluating one health: Are we demonstrating effectiveness? One Health, 3, 5-10. doi: 10.1016/j.onehlt.2016.10.004

X-L Yang, Y-Z Zhang, R-D Jiang, H Guo, W. Zhang, B. Li, P. Daszak, L-F Wang, Z-L Shi. 2017. Genetically diverse filoviruses in Rousettus and Eonycteris spp. bats, China, 2009 and 2015. Emerging Infectious Diseases, 23(3), 482-486. doi: 10.3201/eid2303.161119

S.J. Anthony, K. Gilardi, V. D. Menachery, T. Goldstein, B. Ssebide, R. Mbabazi, I. Navarrete-Macias, E. Liang, H. Wells, A. Hicks, A. Petrosov, D. K. Byarugaba, K. Debbink, K. H. Dinnon, T. Scobey, S. H. Randell, B. L. Yount, M. Cranfield, C. K. Johnson, R. S. Baric, W. I. Lipkin, J. A. K. Mazet. 2017. Further Evidence for Bats as the Evolutionary Source of Middle East Respiratory Syndrome Coronavirus. mBio, 8(2). doi: 10.1128/mBio.00373-17

M. Ali, R. El-Shesheny, A. Kandeil, M. Shehata, B. Elsokary, M. Gomaa, N. Hassan, A. El Sayed, A. El-Taweel, H. Sobhy, F. Folorunso Oludaya, G. Dau[hin, I. El Masary, A. Wossene Wolde, P. Daszak, M. Miller, S. VonDobscheutz, E. Gardner, S. Morzaria, J. Lubroth, Y. Jobre, Makonnen. 2017. Cross-sectional surveillance of Middle East respiratory syndrome coronavirus (MERS-CoV) in dromedary camels and other mammals in Egypt, August 2015 to January 2016. Euro Surveillance, 22(11), 30487. doi: 10.2807/1560-7917.ES.2017.22.11.30487

K.M. Smith, C.M. Machalaba, H. Jones, P. Caceras, M. Popovic, K.J. Olival, K.B. Jebara, W.B. Karesh. 2017. Wildlife hosts for OIE-Listed diseases: considerations regarding global wildlife trade and host–pathogen relationships. Veterinary Medicine and Science. doi: 10.1002/vms3.57 

K.M. Smith, C. Zambrana-Torrelio, A. White, M. Asmussen, C. Machalaba, S. Kennedy, K. Lopez, T. M. Wolf, P. Daszak, D.A. Travis, W.B. Karesh. 2017. Summarizing US wildlife trade with an eye toward assessing the risk of infectious disease introduction. EcoHealth, 1-11. doi: 10.1007/s10393-017-1211-7 

A. Lacroix, V. Duong, V. Hul, S. San, H. Davun, K. Omaliss, S. Chea, A. Hassanin, W. Theppangna, S. Silithammavong, K. Khammavong, S. Singhalath, A. Afelt, Z. Greatorex, A.E. Fine, T. Goldstein, S. Olson, D.O. Joly, L. Keatts, P. Dussart, R. Frutos, P. Buchy. 2017. Diversity of bat astroviruses in Lao PDR and Cambodia. Infectious, Genetics & Evolution, 47, 41-50. doi: 10.1016/j.meegid.2016.11.013

G. Garland-Lewis, C. Whittier, S. Murray, S. Trufan, P.M. Rabinowitz. 2017. Occupational risks and exposures among wildlife health professionals.EcoHealth, 14, 20-28. doi: 10.1007/s10393-017-1208-2 

J. Sotomayor-Bonilla, C.A. Abella-Medrano, A. Chaves, P. Alvarez-Mendizabal, O. Rico-Chavez, S. Ibanez-Bernal, M.K. Rostal, R. Ojeda-Flores, A. Barbachano-Guerrero, G. Gutierrez-Espeleta, A.A. Aguirre, P. Daszak, G. Suzan. 2017. Potential sympatric vectors and mammalian hosts of Venezuelan equine encaphalitis virus in southern Mexico. Journal of Wildlife Diseases, 53(3). doi: 10.7589/2016-11-249


J.H. Epstein, S.J. Anthony, A. Islam, A.M. Kilpatrick, S.A. Khan, N. Ross, I. Smith, J. Barr, C. Zambrana-Torrelio, Y. Tao, P.L. Quan, K. Olival, E.S. Gurley, M.J. Hossain, H.E. Field, M. Fielder, T. Briese, M.R. Mihram, G. Crameri, L-F. Wang, S. Liby, W.I. Lipkin, P. Daszak. 2016. The first phase of PREDICT: Surveillance for emerging infectious zoonotic diseases of wildlife origin (2009-2014). International Journal of Infectious Diseases, 53, 31-32. doi: 10.1016/j.ijid.2016.11.086

T. Smiley Evans, K. Gilardi, P. Barry, B. Ssebide, J. Felix Kinani, F. Nizeyimana, J. Bosco Noheri, D. Byarugaba, A. Mudikikwa, M. Cranfield, J.A.K. Mazet, C.K. Johnson. 2016. Detection of viruses using discarded plants from wild mountain gorillas and golden monkeys. American Journal of Primatology. doi: 10.1002/ajp.22576 

S. Baum, C. Machalaba, P. Daszak, W.B. Karesh. 2016. Beyond operationalizing: The need for evaluation in one health. Annals of Global Health, 82(3): 437-445. doi: 10.1016/j.aogh.2016.04.214

N. Rodrigues Faria, et al. 2016. Zika virus in the Americas: Early epidemiological and genetic findings. Science. doi: 10.1126/science.aaf5036 

Z.F. Greatorex, S.H. Olson, S. Singhalath, S. Silithammavong, A.E. Fine, W. Weisman, B. Douangngeun, W. Theppangna, L. Keatts, M. Gilbert, W.B. Karesh, T. Hansel, S. Zimicki, K. O'Rourke, D.O. Joly, J.A.K. Mazet. 2016. Wildlife trade and human health in Lao PDR: An assessment of the zoonotic disease risk in markets. PLOS One. doi: 10.1371/journal.pone.0150666 

D. Rejmanek, P. Hosseini, J.A.K. Mazet, P. Daszak, T. Goldstein. 2016. Reply to "Complexities of Estimating Evolutionary Rates in Viruses." Journal of Virology90(4): 2156. doi: 10.1128/JVI.02570-15

A. Wiyatno, U. Antonjaya, C.Nisa Ma'roef, S.F. Riswari, H. Djauhari, I.M. Artika, C. Monagin, B.S. Schneider, K.S. Myint, B. Alisjahbana, D. Safari, H. Kosasih. 2016. Detection and identification of coxsackievirus B3 from sera of an Indonesian patient with undifferentiated febrile illness. The Journal of Infection in Developing Countries, 10(8): 880-883. doi: 10.3855/jidc.7573 

X-Y Ge, W-H Yang, H. Pan, J-H Zhou, X. Han, G-J Zhu, J.S. Desmond, P. Daszak, Z-L Shi, Y-Z Zhang. 2016. Fugong virus, a novel hantavirus harbored by the smalll oriental vole (Eothenomys eleusis) in China. Virology Journal, 13(27). doi: 10.1186/s12985-016-0483-9 

C.C.W. Young, K.J. Olival. Optimizing Viral Discovery in Bats. 2016. PLOS One 11: 2. doi: 10.1371/journal.pone.0149237

L. Brierley, M.J. Vonhof, K.J. Olival, P. Daszak, K.E. Jones. 2016. Quantifying global drivers of zoonotic bat viruses: A process-based perspective. The American Naturalist, 187(2). doi: 10.1086/684391


K.J. Olival. 2015. To cull, or not to cull, bat is the question. EcoHealth, 12. doi: 10.1007/s10393-015-1075-7

S. Wacharapluesadee, K.J. Olival, B. Kanchanasaka , P. Duengkae, S. Kaewchot, P. Srongmongkol, G. Ieamsaard, P. Maneeorn, N. Sittidetboripat, T. Kaewpom, S. Petcharat, S. Yingsakmongkon, P.E. Rollin, J.S. Towner, T. Hemachudha. 2015. Surveillance for Ebola virus in wildlife, Thailand. Emerging Infectious Diseases Journal, 21(12). doi: 10.3201/eid2112.150860

C.K. Johnson, P.L. Hitchens, T. Smiley Evans, T. Goldstein, K. Thomas, A. Clements, D.O. Joly, N.D. Wolfe, P. Daszak, W.B. Karesh, J.A.K. Mazet. 2015. Spillover and pandemic properties of zoonotic viruses with high host plasticity. Nature Scientific Reports. 

D. Rejmanek, P.R. Hosseini, J.A.K. Mazet, P. Daszak, T. Goldstien. 2015. Evolutionary dynamics and global diversity of influenza A virus. Journal of Virology. doi: 10.1128/JVI.01573-15

S.J. Anthony, A. Islam, C.K. Johnson, I. Navarrete-Macias, E. Liang, K. Jain, P.L. Hitchens, X. Che, A. Soloyov, A.L. Hicks, R. Ojeda-Flores, C. Zambrana-Torrelio, W. Ulrich, M.K. Rostal, A. Ptrosov, J. Garcia, N. Haider, N.D. Wolfe, T. Goldstein, S.S. Morse, M. Rahman, J.H. Epstein, J.A.K Mzet, P. Daszak, W.I. Lipkin. 2015. Non-random patterns in viral diversity. Nature Communications, 6(8147). doi: 10.1038/ncomms9147

K.A. Murray, N. Preston, T. Allen, C. Zambrana-Torrelio, P.R. Hosseini, P. Daszak. 2015. Global biogeography of human infectious disease. 2015. PNAS, 112(41), 12746-12751. doi: 10.1073/pnas.1507442112

S.H. Olson, C.M. Benedum, S.R. Mekaru, N.D. Preston, J.A.K. Mazet, D.O. Joly, J.S. Brownstein. 2015. Drivers of emerging infectious disease events as a framework for digital detection. Emerging Infectious Diseases, 21(8), 1285-1292. doi: 10.3201/eid2108.141156 

C. Machalaba, C. Romanelli, P. Stoett, S.R. Baum, T.A. Bouley, P. Daszak, W.B. Karesh. 2015. Climate change and health: Transcending silos to find solutions. Annals of Global Health, 81(3), 445-458. doi: 10.1016/j.aogh.2015.08.002

E.H. Loh, K.J. Olival, C. Zambrana-Torrelios, T.L. Bogich, C. Kreuder Johnson, J.A.K. Mazet, W.B. Karesh, P. Daszak. 2015. Targeting transmission pathways for emerging zoonotic disease surveillance and control. Vector-borne & Zoonotic Diseases, 15(7), 432-437. doi: 10.1089/vbz.2013.1563

M.H. Lee, T. Hughes, M.K. Rostal, F. Sitam, C.Y. Lee, J.  Japning, M.E. Harden, A. Griffiths, M. Basir,  J. H. Epstein, N.D. Wolfe, P. Daszak. 2015. Macacine herpesvirus 1 in malaysian free-ranging long-tailed macaques, Malasia, 2009-2011. Emerging Infectious Diseases, 21(7), 1107-1113. doi: 10.3201/eid2107.140162 

C. Castillo-Chavez, R. Curtiss, P. Daszak, S. Levin, O. Patterson, C. Perrings, G. Poste, S. Towers. 2015. Beyond Ebola: Lessons for mitigating pandemics. The Lancel Global Health, 3(7), 354-355. doi: 10.1016/S2214-109X(15)00068- 

T. Smiley Evans, P.A. Barry, K.V. Gilardi, T. Goldstein, J.D. Deere, J. Fike, J. Yee Benard, J. Ssebide, D. Karmacharya, M.R. Cranfield, D. Wolking, B.R. Smith, J.A.K. Mazet, C.K. Johnson. 2015. Optimization of a novel non-invasive oral sampling technique for zoonotic pathogen surveillance in nonhuman primates. PLOS Neglected Tropical Diseases, 9(6). doi: 10.1371/journal.pntd.0003813

C. Machalaba, W.B. Karesh. 2015. Envisioning a world without emerging disease outbreaks. Solutions, 6(2), 63-71. doi

C. Machalaba, S.E. Elwood, S. Forcella, K.M. Smith, K. Hamilton,K.B.  Jebara, D.E. Swayne, R.J. Webby, E. Mumford, J.A.K. Mazet, N. Gaidet, P. Daszak, W.B. Karesh. 2015. Global avian influenza surveillance in wild: A strategy to capture viral diversity. Emerging Infectious Diseases, 21(4). doi:

S. Wacharapleusadee, P. Duengkae, A. Rodparn, T. Kaewpom, P. Maneeorn, B. Kanchanasaka, S. Yinsakmongkon, N. Sittidetboripat, C. Chareesaen, N. Khlangsap, A. Pidthong, K. Leadprathom, S. Ghai, J.H. Epstein, P. Daszak, K.J. Olival, P.J. Blair, M.V. Callahan, T. Hemachudha. 2015. Diversity of coronavirus in bats from Eastern Thailand. Virology Journal, 12(57). doi: 10.1186/s12985-015-0289-1

T. Seimon, S. Olson, K.J. Lee, G. Rosen, A. Ondzie, K. Cameron, P. Reed, S. Anthony, D. Joly, D. McAloose, W.I. Lipkin. 2015. Adenovirus and herpesvirus diversity in free-ranging great apes in the sangha region of the Republic of Congo. PLOS One, 10(3). doi: 10.1371/journal.pone.0118543

M. Springborn, R.P. Keller, S. Elwood, C.M. Romagosa, C. Zambrana-Torrelio, P. Daszak. 2015. Integrating invasion and disease in the risk assessment live bird trade. Diversity and Distributions, 21, 101-110. doi: 10.1111/ddi.12281 

K.J. Olival, K. Dittmar, Y. Bai, M.K. Rostal, B.R. Lei, P. Daszak, M. Kosoy. 2015. Bartonella spp. in a Puerto Rican bat community. Journal of Wildlife Diseases, 51(1), 274-278. doi: 10.7589/2014-04-113 

G. Suzán, G.E. García-Peña, I. Castro-Arellano, O. Rico, A.V. Rubio, M.J. Tolsá,B. Roche, P.R. Hosseini, A. Rizzoli, K.A. Murray, C. Zambrana-Torrelio, M. Vittecoq, X. Bailly, A.A. Aguirre, P. Daszak, A.H. Prieur-Richard, J.N. Mills, J.F. Guégan. 2015. Metacommunity and phylogenetic structure determine wildlife and zoonotic infectious disease patterns in time and space. Ecology and Evolution, 5(5), 865-873. doi: 10.1002/ece3.1404


J.A.K. Mazet, M. Uhart, J. Keyyu. 2014. Stakeholders in One HealthRevue scientifique et technique - Office international des epizooties, 33(2):443-452.

J.N. Mandl, R. Ahmed, L. Barreiro, P. Daszak, J.H. Epstein, H.W. Virgin, M.B Feinberg. 2014. Reservoir host immune responses: One approach to understanding emerging zoonotic viruses. Cell160, 20-35. doi: 10.1016/j.cell.2014.12.003

I.A. Bisson, P.P. Marra, B. Ssebide. 2014. Early detection of emerging zoonotic diseases with animal morbidity and mortality monitoring.EcoHealth. doi: 10.1007/ s10393-014-0988-x

N. N'Dilimabaka, N. Berthet, V. Rougeron, J. B. Mangombi, P. Durand, G.D. Maganga, C. Bouchier, B.S. Schneider, J. Fair, F. Renaud, E.M. Leroy. 2014. Evidence of lymphocytic choriomeningitis virus (LCMV) in domestic mice in Gabon: Risk of emergence of LCMV encephalitis in Central Africa.Journal of Virology, 89(2), 1456-1460. doi: 10.1128/JVI.01009-14

J.S. Schwind, D.J. Wolking, J.S. Brownstein, PREDICT Consortium, J.A.K. Mazet, W.A. Smith. 2014. Evaluation of local media surveillance for improved disease recognition and monitoring in global hotspot regions. PLOS One, 9(10), e110236. 

R. Elahi, A. Islam, M.S. Hossain, K. Mohiuddin, A. Mikolon, S.K. Paul, P.R. Hosseini, P. Daszak, M.S. Alam. 2014. Prevalence and diversity of avian haematozoan parasites in wetlands of Bangladesh. Journal of Parasitology Research. doi: 10.1155/2014/493754

C. Perrings, C. Castillo-Chavez , G. Chowell-Puente, P. Daszak, E.P. Fenichel, D.C. Finnoff, R.D. Horan, A.M. Kilpatrick, A.P. Kinzig, N.V. Kuminoff, S.A. Levin, B. Morin, K.F. Smith, M. Springborn. 2014. Merging economics and epidemiology to improve the prediction and management of infectious disease. EcoHealth, 11, 464-475. doi: 10.1007/s10393-014-0963-6 

I.M. Mombo, N. Berthet, C. Bouchier, J. N. Fair, B. S. Schneider, F. Renaud, E. M. Leroy, V. Rougeron. 2014. Characterization of a genogroup I sapovirus isolated from chimpanzees in the Republic of Congo. Genome Announcements, 2(4). doi: 10.1128/genomeA.00680-14 

J. Sotomayor-Bonilla, A. Chaves, O. Rico-Chávez, M.K. Rostal, R. Ojeda-Flores, M. Salas-Rojas, Á. Aguilar-Setien, S. Ibáñez-Bernal, A. Barbachano-Guerrero, G. Gutiérrez-Espeleta, .J.L. Aguilar-Faisal, A.A. Aguirre, P. Daszak, G. Suzán. 2014. Dengue virus in bats from southeastern Mexico.American Journal of Tropocal Medicin and Hygiene, 91(1), 129-131. doi: 10.4269/ajtmh.13-0524 

J.S. Schwind, T.Goldstein, K.Thomas, PREDICT Consortium, J.A.K.Mazet, W.A.Smith. 2014. Capacity building efforts and perceptions for wildlife surveillance to detect zoonotic pathogens: Comparing stakeholder perspectives. BMC Public Health, 14(684). doi: 10.1186/1471-2458-14-684 

B. Hu, A.A. Chmura, J. Li, G. Zhu, J.S. Desmond, Y. Zhang, W. Zhang, J.E. Epstein, P. Daszak, Z. Shi. 2014. Detection of diverse novel astroviruses from small mammals in China. Journal of General Virology, 95, 2442-2449. doi: 10.1099/vir.0.067686-0 

G.D. Maganga, M. Bourgarel, P. Vallo, T.D. Dallo, C. Ngoagouni, J. Felix Drexler, C. Drosten, E.R. Nakouné, E.M. Leroy, S. Morand. 2014. Bat distribution size or shape as determinant of viral richness of African bats. PLOS One, 9(6). doi: 10.1371/journal.pone.0100172

S.N. Naccache, S. Federman, N. Veerarghavan, M. Zaharia, D. Lee, E. Samayoa, J. Bouquet, A.L. Greninger, K-C Luk, B. Enge, D. Wadford, S. Messenger, G. Grard, E. Leroy, B.S. Schneider, J.N. Fair, N. Wolfe, M. Martinez, P. Isa, C. Arias, J.L. DeRisi, T. Sittler, J. Hackett, S. Miller, C.Y. Chiu. 2014. A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples. Genome Research, 24, 1180-1192. doi: 10.1101/gr.171934.113 

L. Yuan, M. Li, L. Li, C. Monagin, A. Chmura, B.S. Schneider, J. Epstein, X. Mei, Z. Shi, P. Daszak, J. Chen. 2014. Evidence for retrovirus and paramyxovirus co-Infection of multiple bat species in China. Viruses, 6, 2138-2154. doi: 10.3390/v6052138

S. Lyons, B.S. Schneider, N.D. Wolfe, G. Culshaw, B. Corcoran, A.E. Durham, A. Kapoor, B.C. McGorum, P. Simmonds. 2014. Viraemia frequencies and seroprevalences of non-primate hepacivirus and equine pegiviruses in horses and other mammalian species. Journal of General Virology, 95, 1701-1711. doi: 10.1099/vir.0.065094-0 

K. J. Olival, D. Hayman. 2014. Filoviruses and bats: Current knowledge and future directions. Viruses, 6, 1759-1788. doi: 10.3390/v6041759

T. Briese, N. Mishra, K. Jain, I.S. Zalmout, O.J. Jabado, W.B. Karesh, P. Daszak, O.B. Mohammed, A.N. Alagaili, W.I. Lipkin. 2014. Middle East respiratory syndrome coronavirus quasi-species that include homologues of human isolates revealed through whole genome analysis and virus cultured from dromedary camels in Saudi Arabia. mBio, 5(3). doi: 10.1128/mBio.01146-14

N. Haider, M.S. Rahman, S.U. Khan, A. Mikolon, E.S. Gurley, M.G. Osmani, I.S. Shanta, S.K. Paul, L. Macfarlane-Berry, A. Islam, J. Desmond, J.H. Epstein, P. Daszak, T. Azim, S.P. Luby, N. Zeidner, M.Z. Rahman. 2014. Identification and epidemiology of a rare HoBi-like pestivirus strain in Bangladesh.Transboundary and Emerging Diseases, 61, 193-198. doi: 10.1111/tbed.12218 

S.H. Olson, J. Parmley, C. Soos, M. Gilbert, N. Latorre-Margalef, J.S. Hall, P.M. Hansbro, F.Leighton, V. Munster, D. Joly. 2014. Sampling strategies and biodiversity of influenza A subtypes in wild birds. PLOS One, 9(3). doi: 10.1371/journal.pone.0090826

H. Razuri , R. Tokarz, B.M. Ghersi, G. Salmon-Mulanovich, M.C. Guezala, C. Albujar, A.P. Mendoza, Y.O. Tinoco, C. Cruz, M. Silva, A. Vasquez, V. Pacheco, U. Ströher, L. Wiggleton Guerrero, D. Cannon, S.T. Nichol, D.L. Hirschberg, W.I. Lipkin, D.G. Bausch, J.M. Montgomery. 2014. Andes hantavirus variant in rodents, southern Amazon Basin, Peru. Emerging Infectious Diseases, 20(5), 257-260. doi:

J. R. Kugelman, S. C. Johnston, P. M. Mulembakani, N. Kisalu, M. S. Lee, G. Koroleva, S. E. McCarthy, M. C. Gestole, N. D. Wolfe, J. N. Fair, B. S. Schneider, L. L. Wright, J. Huggins, C. A. Whitehouse, E. O. Wemakoy, J. J. Muyembe-Tamfum, L. E. Hensley, G. Palacios, A. W. Rimoin. 2014. Genomic variability of monkeypox virus among humans, Democratic Republic of the Congo. Emerging Infectious Diseases, 21(4). doi: 10.3201/eid2104.141415 

M. LeBreton, W.M. Switzer, C.F Djoko, A. Gillis, H. Jia, M.M. Sturgeon, A. Shankar, H. Zheng, G. Nkeunen, U. Tamoufe, A. Nana, J. Le Doux Diffo, B. Tafon, J. Kiyang, B.S Schneider, D.S Burke, N.D. Wolfe. 2014. A gorilla reservoir for human T-lymphotropic virus type 4 (HTLV-4). Emerging Microbes and Infections, 3. doi: 10.1038/emi.2014.7 

Pernet O, Schneider BS, Beaty SM, LeBreton M, Yun TE, Park A, Zachariah TT, Bowden TA, Hitchens P, Ramirez CM, Daszak P, Mazet J, Freiberg AN, Wolfe ND, Lee B. 2014. Evidence for henipavirus spillover into human populations in Africa. Nature Communications, 5, 5342. doi: 10.1038/ncomms6342


S. Olson, M. Gilbert, M. Cheng, J.A.K. Mazet, D. Joly. 2013. Historic prevalence and distribution of avian influenza A subtype H7N9 in wild birds: implications for wild bird surveillance. Emerging Infectious Diseases, 19(12). doi:

X.Y. Ge, J.L. Li, X.L. Yang, A.A. Chmura, J.H. Epstein, B. Hu, W. Zhang, C. Peng, Y.Y. Zhang, C.M. Luo, B. Tang, N. Wang, Y. Zhu, G. Crameri, L.F. Wang, P. Daszak, Z.L. Shi. 2013. First isolation and characterization of bat SARS-like coronaviruses that use the ACE2 receptor. Nature. doi: 10.1038/nature12711

T.T. Lam,  J. Wang Y. Shen,  B. Zhou, L. Duan, C.L. Cheung, C. Ma, S.J. Lycett, C.Y. Leung, X. Chen, L. Li, W. Hong, Y. Chai, L. Zhou, H. Liang, Z. Ou, Y. Liu, A. Farooqui, D.J. Kelvin, L.L. Poon, D.K. Smith, O.G. Pybus, G.M. Leung, Y. Shu, R.G. Webster, R.J. Webby, J.S. Peiris, A. Rambaut, H. Zhu, Y. Guan. 2013. The genesis and source of the H7N9 influenza viruses causing human infections in china. Nature, 502, 241-244. doi: 10.1038/nature12515

K.J. Olival, R.L. Hoguet, P. Daszak. 2013. Linking the historical roots of environmental conservation with human and wildlife health. EcoHealth.doi: 10.1007/s10393-013-0862-2

P.R. Hosseini, T. Fuller, R. Harrigan, D. Zhao, C. S. Arriola, A. Gonzalez, M. J. Miller, X. Xiao, T. B. Smith, J. H. Jones and P. Daszak. 2013. Metapopulation dynamics enable persistence of influenza A, including A/H5N1, in poultry. PLOS One, 8(12). doi: 10.1371/journal.pone.0080091

K.J. Olival, R.L. Hoguet, P. Daszak. 2013. Linking the historical roots of environmental conservation with human and wildlife health. EcoHealth. doi: 10.1007/s10393-013-0862-2

E.H. Loh, K.A. Murray, C. Zambrana-Torrelio, P.R. Hosseini, M. Rostal, W.B. Karesh, P. Daszak. 2013. Ecological approaches to studying zoonoses.Microbiology Spectrum, 1(2). doi: 10.1128/microbiolspec.OH- 0009-2012.f1

S.J. Anthony, J.H. Epstein, K.A. Murray, I. Navarrete-Macias, C.M. Zambrana-Torrello, A. Solovyov, R. Ojeda-Flores, N.C. Arrigo, A. Islam, S. A. Khan, P Hosseini, T.L. Bogich, K.J. Olival, M. Sanchez-Leon, W. Karesh, T. Goldstein, S.P. Ruby, S.S. Morse, J.K. Mazeet, P. Daszak, W.L. Lipkin. 2013. A strategy to estimate unknown viral diversity in mammals. mBio, 4(5). doi: 10.1128/mBio.00598-13

K.J. Olival, C.W. Dick, N.B. Simmons, J.C. Morales, D.J. Melnick, K. Dittmar, S.L. Perkins, P. Daszak, R. DeSalle. 2013. Lack of population genetic structure and host specificity in the bat fly, cyclopodia horsfieldi, across species of pteropus bats in Southeast Asia. Parasites & Vectors, 6(231). doi: 10.1186/1756-3305-6-231

R.C. Kading, E.M. Borland, M. Cranfield, A.M. Powers. 2013. Prevalence of antibodies to alphaviruses and flaviviruses in free-ranging game animals and nonhuman primates in the Greater Congo Basin. Journal of Wildlife Diseases, 49(3), 587-599. doi: 10.7589/2012-08-212

S. Funk, T.L. Bogich, K.E. Jones, A.M.Kilpatrick, P. Daszak. 2013. Quantifying trends in disease impact to produce a consistent and reproducible definition of an emerging infectious disease. PLOS One, 8(8). doi: 10.1371/journal.pone.0069951

S. Wacharapluesadee, C. Sintunawa, T. Kaewpom, K. Khongnomnan, K.J. Olival, J.H. Epstein, A. Rodpan, P. Sangsri, N. Intarut, A. Chindamporn, K. Suksawa, T. Hemachudha. 2013. Group C betacoronavirus in bat guano fertilizer, Thailand. Emerging Infectious Diseases, 19(8). doi:

H.A. Thomassen, T. Fuller, J.H.G. Shiplacoff, P.M. Mulembakani, S.C. Johnston, J.O. Lloyd Smith, N.K. Kisalu, T.K. Lutete, S. Blumberg, J.N. Fair, N.D. Wolfe, R.L. Shongo, P. Formenty, H. Meyer, L.L. Wright, J-J Muyembe, W. Buermann, E. Okitolonda, L. Hensley, T.B. Smith, A.W. Rimoin. 2013. Pathogen-host associations and range shifts of human monkeypox in response to climate change in Central Africa. PLOS One, 8(7), e66071. 

G. Zhu, R. Wang, F. Xuan, P. Daszak, S.J. Anthony, S. Zhang, L. Zhang, G. He. 2013. Characterization of recombinant H9N2 influenza viruses isolated from wild ducks in China. Veterinary Microbiology, 166(3-4), 327-336. 

J. Levinson, T.L. Bogich, K.J. Olival, C. Kreuder-Johnson, J.H. Epstein, W.B. Karesh, P. Daszak. 2013. Targeting surveillance for zoonotic viruses.Emerging Infectious Diseases, 19(5). doi:

J. Lu, J. Wu, X. Zeng, D. Guan, L. Xou, L. Yi, L. Liang, H. Ni, M. Kang, X. Zhang, H. Zhong, X. He, C. Monagin, J. Lin, C. Ke. 2013. Continuing ressortment leads to the genetic diversity of influenza H7N9 in Guangdong China. Journal of Virology, 88(15), 8297-8306. doi: 10.1128/JVI.00630-14 

N.D. Preston, P. Daszak, R.R. Colwell. 2013. The human environment interface: Applying ecosystem concepts to health. One Health Ed. Springer, 365, 83-100. doi: 10.1007/82_2013_317 

S.J. Anthony, R. Ojeda-Flores, O. Rico-Chávez, I. Navarrete-MaciasI, C. Zambrana-Torrelio, M.K. Rostal, J.H. Epstein, T. Tipps, E. Liang,M. Sanchez-Leon, J. Sotomayor-Bonilla, R. Ávila, R.A. Medellín, T. Goldstein, C. Suzán, P  Daszak, W.I. Lipkin. 2013. Coronaviruses in bats from Mexico. Journal of General Virology, 94, 1028-1038. doi: DOI 10.1099/vir.0.049759-0

P.L. Quan, C. Firth, J.M. Conte, S.H. Williams, C. Zambrana-Torrelio, S.J. Anthony, J.A. Ellison, A.T. Gilbert, I.V. Kuzmin, M. Niezgoda, M.O. V. Osinubi, S. Recuenco, W. Markotter. L. Breiman, Kalemba, J. Malekani, K.A. Lindblade, M.K. Rostal, R. Ojeda-Flores, C. Suzan, L.B. Davis, D.M. Blau, A.B. Ogunkoya, D.A.A. Castillo, D. Moran, S. Ngam, D. Akaibe, B. Agwanda, T. Briese, J.M. Epstein, P. Daszak, C.E. Rupprecht, E.C. Holmes, W.I. Lipkin. 2013. Bats are a major natural reservoir for hepaciviruses and pegiviruses. PNAS, 110(20), 8194-8199. doi: 10.1073/pnas.1303037110 

K.A. Murray, P. Daszak. 2013. Human ecology in pathogenic landscapes: Two hypotheses on how land use change drives viral emergence.Current Opinion in Virology, 3(1), 79-83. doi: 10.1016/j.coviro.2013.01.006

K.J. Olival, A. Islam, M. Yu, S.J. Anthony, J.H. Epstein, S.A. Khan, S.U. Khan, G. Crameri, L-F. Wang, W.I. Lipkin, S.P. Luby, P. Daszak. 2013. Ebola virus antibodies in fruit bats, Bangladesh. Emerging Infectious Diseases, 19(2). doi: 10.3201/eid1902.120524 

S. S. Morse.  2013. Public health disease surveillance networks. Microbiology Spectrum. 

P. Daszak, C. Zambrana-Torellio T.L. Bogich, M. Fernandez, J.H. Epstein, K.A. Murray, H. Hamilton. 2013. Interdisciplinary approaches to understanding disease emergence: the past, present, and future drivers of nipah virus emergence. PNAS, 110(1), 361-3688. doi: 10.1073/pnas.1201243109

T.L Bogich, S. Funk, T.R. Malcolm, N. Chhun, J.H. Epstein, A. Chmura, O.C. Hutchison, C. Doyle-Capitman, R. Deaville, S.S. Morse, A.A. Cunningham, P. Daszak. 2013. Using network theory to identify the causes of disease outbreaks of unknown origin. Journal of Royal Society Interface, 10. doi: 10.1098/rsif.2012.0904

M.C. González, S.S. Morse. 2013. Global influenza surveillance: Advances in technology. Influenza Surveillance Expert Reviews/Future Science, 23-39. doi: 10.2217/ebo.13.666


A.L. Hansen, A. Li, D. Jolly, S. Mekaru, J. Brownstein. 2012. Digital surveillance: A novel approach to monitoring the illegal wildlife trade. PLOS One, 7(12). doi: 10.1371/journal.pone.0051156

T.L Bogich, R. Chunara, D. Scales, E. Chan, L. Pinheiro, A. Chmura, D. Carroll, P. Daszak, J.S. Brownstein. 2012. Preventing pandemics via international development: A systems approach. PLoS Medicine, 9(12), e1001354. 

M.K. Rostal, K.J. Olival, E. Loh, W.B. Karesh. 2012. Wildlife: The need to better understand the risks and linkages. One Health Ed. Springer, 365, 101-125. doi: 10.1007/82_2012_271

S. S. Morse, J. Mazet, M. Woolhouse, C.R. Parrish, D. Carroll, W.B. Karesh, C. Zambrana-Torrelio, W.I. Lipkin, P. Daszak. 2012. Prediction and prevention of the next pandemic zoonosis. The Lancet, 380, 1956-1965. 

S.H. Olson, K. Cameron, P. Reed, A. Ondzie, D. Joly. 2012. Maximizing nonhuman primate fecal sampling in the Republic of Congo. Journal of Wildlife Diseases, 48(4), 888-898. doi: 10.7589/2011-11-341

W.B. Karesh, A. Dobson, J.O. Lloyd-Smith, J. Lubroth, M.A. Dixon, M. Bennett, S. Aldrich, T. Harrington, P. Furmenty, E.H. Loh, C. Machalaba, M.J. Thomas, D.L. Heymann. 2012. The Ecology of zoonoses: Their natural and unnatural histories. The Lancet, 380, 1936-1945. 

W.B. Karesh, K.M. Smith, M.V. Asmussen. 2012. The unregulated and informal trade in wildlife: Implications for biodiversity and health. Animal Health and Biodiversity, Preparing for the Future. doi: 978-92-9044-891-4

E.V. Langlois, K. Campbel, A.H. Prieur-Richard, W.B. Karesh, P. Daszak. 2012. Towards a better integration of global health and biodiversity in the new sustainable development goals beyond Rio+20. i, 381-385. doi: 10.1007/s10393-012-0800-8

G. Grard, J.N. Fair, D. Lee, E. Slikas, I. Steffen, M-T Jean-Jacques, M. Makuwa, P. Mulemkebani, T. Sittler, N. Veeraraghavan, G. Ruby, C. Wang, J.A.K. Mazet, A. Rimoin, T. Taylor, B. S. Schneider, G. Simmons, E. Delwart, N. D. Wolfe, C. Chiu, E.M. Leroy. 2012. A novel rhabdovirus associated with acute hemorrhagic fever in Central Africa. PLOS Pathogens, 8(9), e1002924. doi: 10.1371/journal.ppat.1002924 

S. Weiss, K. Nowak, G. Wibbelt, J. Fahr, J-V. Mombouli, B.S. Schneider, F.H. Leendertz. 2012. Henipavirus-related sequences in fruit bats from a bushmeat market in the Republic of Congo. Emerging Infectious Diseases, 18(9). doi:

C. Adlhoch, M. Kaiser, A. Loewa, M. Ulrich, C. Forbrig, E.V. Adjogoua, C. Akoua-Koffi, E. Couacy-Hymann, S. A. J. Leendertz, W. Rietschel, C. Boesch, H. Ellerbrok, B.S. Schneider, F.H. Leendertz. 2012. Diversity of Parvovirus 4 like viruses in humans,  chimpanzees and monkeys in hunter prey relationships. Emerging Infectious Diseases, 18(5). doi: 10.3201/eid1805.111849

S.H. Olson, P. Reed, K.N. Cameron, B. J. Ssebide., C.K. Johnson, S. S. Morse, W.B. Karesh, J.A.K. Mazet, D.O. Joly. 2012. Dead or alive: animal sampling during Ebola hemorrhagic fever outbreaks in humans. Emerging Health Threats, 5, 9134. doi: 10.3402/ehtj.v5i0.9134 

C.F. Djoko, N.D. Wolfe, A.F. Aghokeng, M. LeBreton, F. Liegeois, U. Tamoufe, N. Ortiz, B. L. Pike, W.F. Mbacham, J.K. Carr, A. W. Rimoin, J.N. Fair, B.S. Schneider, E. Mpoudi-Ngole, E. Delaporte, D.S. Burke, M. Peeters. 2012. Failure to detect simian immunodeficiency virus in a large Cameroonian cohort with high non-human primate exposure. EcoHealth, 9, 17-23. doi: 10.1007/s10393-012-0751-0

Morse, S.S. 2012. Public health disease surveillance networks. One Health: People, Animals, and Environment, 10(1), 6-16. doi: 10.1089/bsp.2011.0088

S. Lyons, C. Sharp, M. LeBreton, C.F. Djoko, J.A. Kiyang, F. Lankester, T.G. Bibila, U. Tamoufe, J.N. Fair, N.D. Wolfe, P. Simmonds. 2012. Species association of hepatitis B virus (HBV) in non-human apes: Evidence for recombination between gorilla and chimpanzee variants. PLOS One, 7(3). doi: 10.1371/journal.pone.0033430

H. Harvala, C.L. McIntyre, N. Imai, L. Clasper, C.F. Djoko, M. Lebreton, M. Vermeulen, A. Saville, F. Mutapi, U. Tamoufé, J. Kiyang, T.G. Biblia, N. Midzi, T. Mduluza, J. Pépin, R. Njoum, T. Smura, J.N. Fair, N.D. Wolfe, M. Roivainen, P. Simmonds. 2012. High seroprevalence of enterovirus infections in apes and old world monkeys. Emerging Infectious Diseases, 18(2). doi:

K. Campbell, D. Cooper, W.B. Karesh, C. Machalaba, P. Daszak, B. Dias, A.H. Prieur-Richard, D. Campbell-Lendrum. 2012. Strengthening international cooperation for health and biodiversity. EcoHealth. doi: 10.1007/s10393-012-0764-8


G. Grard, R. Biek, & Jean-Jacques Muyembe Tamfum. J. N. Fair, N.D. Wolfe. P. Formenty, J. Paweska, E. Leroy. 2011. Emergence of divergent Zaire Ebolavirus strains in the Democratic Republic Of Congo in 2007 and 2008. Journal of Infectious Disease, 204, S776-S784. doi: 10.1093/infdis/jir364 

G. Grard, Jan F. Drexler, J.N. Fair,  J-J Muyembe, X. de Lamballerie, N.D. Wolfe, C. Drösten, E. Leroy. 2011. Re-emergence of crimean-congo hemorrhagic fever virus in Central Africa. PLOS One, 5(10). doi: 10.1371/journal.pntd.001350 

E.J. Murray, S.S. Morse. 2011. Seasonal oscillation of human infection with influenza A/H5N1 in Egypt and Indonesia. PLOS One, 6(9). doi: 10.1371/ journal.pone.0024042

G. Grard, Jan F. Drexler, J.N. Fair,  J-J Muyembe, X. de Lamballerie, N.D. Wolfe, C. Drösten, E. Leroy. 2011. Re-emergence of crimean-congo hemorrhagic fever virus in Central Africa. PLOS One, 5(10). doi: 10.1371/journal.pntd.001350

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L. Etienne, E. Nerrienet, M. Lebreton, G.T. Bibila, Y. Foupouapouognigni, D. Rousset, A. Nana, C.F. Djoko, U. Tamoufe, A.F. Aghokeng, E. Mpoudi-Ngol, E. Delaporte, M. Peeters, N.D. Wolfe, A. Ayouba. 2011. Characterization of a new simian immunodeficiency virus strain in a naturally infected Pan troglodytes chimpanzee with AIDS related symptoms. Retrovirology, 8(4). doi: 10.1186/1742-4690-8-4


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C.P. Sharp, M. LeBreton, K. Kantola, A. Nana, J. Le Doux Diffo, C.F. Djoko, U. Tamoufe, J.A. Kiyang, R.G. Babila, E.Mpoudi Ngole, O.G. Pybus, E. Delwart, E. Delaporte, M. Peeters, M. Soderlund-Venermo, K. Heman, N.D. Wolfe, P. Simmonds. 2010. Widespread infection with homologues of human parvoviruses B19, PARV4, and human bocavirus of chimpanzees and gorillas in the wild. Journal of Virology, 84(19), 10289-10296. doi: 10.1128/JVI.01304-10

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Articles that benefited from intellectual developments from the PREDICT Project


T. Smiley Evans, L. Lowenstine, K. Gilardi, P. Barry, B. Ssebide, J. Kinani, F. Nizeyimana, J.Noheri, M. Cranfield, A. Mudakikwa. T. Goldstein, J.A.K. Mazet. 2017. Mountain gorilla lymphocryptovirus has Epstein-Barr virus-like epidemiology and pathology in infants. Scientific Reports, 7(1):5352. doi: 10.1038/s41598-017-04877-1

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A. Islam, A.K.M. Saifuddin, A.A. Faruq, S. Islam, S. Shano, M. Alam, M.M. Hassan. 2016. Antimicrobial residues in tissues and eggs of laying hens in Chittagong, Bangladesh. International Journal of One Health, 2(11), 75-80. doi: 10.14202/IJOH.2016.75-80

W.B. Karesh, R. Kock, C. Machalaba. 2016. CITES: In sickness and in health, 13(3), 441-442. doi: 10.1007/s10393-016-1154-4 

A.A. Faruq, M.M. Hassan, M.M. Uddin, M.L. Rahman, T.M. Rakib, M. Alam, A. Islam. 2016. Prevalence and multidrug resistance pattern of Salmonella isolated from resistant wild birds of Bangladesh. International Journal of One Health, 2(7), 35-41. doi: 10.14202/IJOH.2016.35-41

P. Stoett, P. Daszak, C. Romanelli, C. Machalaba, R. Behringer, F. Chalk, S. Cornish, S. Dalby, B. Ferreira de Souza Dias, Z. Iqbal, T. Koch, F. Krampe, M. Lo, K. Martin, K. Matthews, J.W. Nickerson, J. Orbinski, A. Price-Smith, A-H Prieur-Richard, A. Raja, D.M. Secko, A. Suazo, A. Swain. 2016. Avoiding catastrophes: seeking synergies among the public health, environmental protection, and human security sectors. The Lancet Global Health, 4(10), e680-e681.

T. Mahmud, M.M. Hassan, M. Alam, M.M Khan, M.S. Bari, A. Islam. 2016. Prevalence and multidrug-resistant pattern of Salmonella from the eggs of egg-strong trays of retail markets of Bangladesh. International Journal of One Health, 2(2), 7-11.

K. Islam, A. Ahad, M. Barua, A. Islam, S. Chakma, C. Dorji, M.A. Uddin, S. Islam, A.S.M.L Ahasan. 2016. Isolation and epidemiology of multidrug resistant Escherichia coli from goats in Cox's bazar, Bangladesh. Journal of Advanced Veterinary and Animal Research, 3(2), 166-172. doi: 10.5455/javar.2016.c147

X.Y. Ge, W.H. Yang, H. Pan, J.H. Zhou, G.J. Zhu, J.S. Desmond, P. Daszak, Z.L. Shi, Y.Z. Zhang. 2016. Fugong virus, a novel Hantavirus harbored by the small oriental vole (Eothenomys Eleusis) in China. Virology Journal. doi: 10.1186/s12985-016-0483-9


J.A.K. Mazet, Q. Wei, G, Zhao, D.A.T. Cummings, J.S. Desmound, J. Rosenthal, C.H. King, W. Cao, A.A. Chmura, E.A. Hagan, S. Zhang, X. Xiao, J. Xu, Z. Shi, F. Feng, X. Liu, W. Pan, G. Zhu, L. Zuo, P. Daszak. 2015. Joint China-US call for employing a transdisciplinary approach to emerging infectious diseases. EcoHealth, 12(50). doi: 10.1007/s10393-015-1060-1

N. Shanee, A.P. Mendoza, S. Shanee. 2015. Diagnostic overview of the illegal trade in primates and law enforcement in Peru. American Journal of Primatology. doi: 10.1002/ajp.22516 

K.V. Gilardi, T.R. Gillespie, F.H. Leendertz, E.J. Macfie, D.A. Travis, C.A. Whittier, E.A. Williamson. 2015. IUCN Best Practice Guidelines for Health Monitoring and Disease Control in Great Ape PopulationsIUCN, 56. ISBN: 978-2-8317-1274-1

S.I. Jayme, H.E. Field, C. de Jong, K.J. Olival, G. Marsh, A.M. Tagtag, T. Hughes, A.C. Bucad, J. Barr, R.R. Azul, L.M. Retes, A. Foord, M. Yu, M.S. Cruz, I.J. Santos, T.M.S. Lim, C.C. Benigno, J.H. Epstein, L.F. Wang, P. Daszak, S.H. Newman. 2015. Molecular evidence of ebola reston virus infection in Philippine bats. Virology Journal, 3, 107. doi: 10.1186/s12985-015-0331-3

W. De, K. Jing, Z. Huan, Z.H. Qiong, C. Monagin, Z.J. Min, H. Ping, K.C. Wen, L.J. Yan. 2015. Scrub typhus, a disease with increasing threat in Guangdong, China. PLOS One, 10(2). doi: 10.1371/journal.pone.0113968

I. Bueno, K.M. Smith, F. Sampedro, C.C. Machalaba, W.B. Karesh, D.A. Travis. 2015. Risk Prioritization Tool to Identify the Public Health Risks of Wildlife Trade: The Case of Rodents from Latin America. Zoonoses and Public Health. doi: 10.1111/zph.1222


G.D. Maganga, J. Kapetshi, N. Berthet, B. Kebela Ilunga, F. Kabange, P. Mbala Kingebeni, V. Mondonge, J.J.T. Muyembe, E. Berthera, S. Briand and J. Cabore. (2014). Ebola virus disease in the Democratic Republic of Congo. New England Journal of Medicine, 371(22), 2083-2091.

A.N. Alagaili, T. Briese, N. Mishra, V. Kapoor, S.C. Sameroff, E. de Wit, V. J. Munster, L.E. Hensley, I.S. Zalmout, A. Kapoor, J. H. Epstein, W.B. Karesh, P. Daszak, O.B. Mohammed, W.I. Lipkin. (2014). Middle east respiratory syndrome coronavirus infection in dromedary camels in Saudi Arabia. mBio, 5(2). doi: 10.1128/mBio.00884-14

B. Lei, K.J. Olival. (2014). Contrasting patterns in mammal-bacteria coevolution:  Bartonella and Leptospira in bats and rodents. PLOS Neglected Tropical Diseases, 8(3), e2738. 

E.J. Aston, P. Major, D.D. Bowman, H.O. Mohammed, J.L. Liotta, O. Kwok. J.P. Dubey. (2014). Use of filter papers to determine seroprevalence of toxoplasma gondii among hunted ungulates in remote Peruvian Amazon. International Journal for Parasitology, 3, 15-19. doi: 10.1016/j.ijppaw.2013.12.001

J. Pike, T.L. Bogich, S.E. Elwood, D.C. Finnoff, P. Daszak. (2014). Economic optimization of a global stategy to address the pandemic threat. PNAS, 111(52), 18519-18523. doi: 10.1073/pnas.1412661112

J.C. Iles, J. Raghwani, G. L. Abby Harrison, J. Pepin, C.F. Djoko, U. Tamoufe, M. Lebreton, B.S. Schneider, J.N. Fair, F.M. Tshala, P.K. Kayembe, J.J. Muyembe, S. Edidi-Basepeo, N.D. Wolfe, P. Simmonds, P. Klenerman, O.G. Pybus. (2014). Phylogeography and epidemic history of hepatitis C virus genotype 4 in Africa. Virology, 464-465, 233-243. doi: 10.1016/j.virol.2014.07.006

K. Gilardi, K. Oxford, D. Gardener-Roberts, J.F. Kinani, L. Spelman, P. Barry, M. Cranfield, L. Lowenstine. (2014). Human herpes simplex virus type 1 in confiscated gorilla. Emerging Infectious Diseases

K.S.A. Myint, H. Kosasih, I.M. Artika, A. Perkasa, M. Puspita, C.N. Ma’roef, U. Antonjaya, J.P. Ledermann, A.M. Powers, B. Alisjahbana. (2014). West nile virus documented in Indonesia from acute febrile illness specimens. American Journal of Tropical Medicine & Hygiene, 90(2), 260-262. doi: 10.4269/ajtmh.13-0445

L. Shender,  M. De Los Santos,  J. Montgomery, P. Conrad, B. Ghersi, H. Razuri, A. Lescano, J.K. Mazet. (2014). Native rodent species are unlikely sources of infection for leishmania (viannia) braziliensis along the transoceanic highway in Madre de Dios, Peru. PLOS One, 9(7). 

M. Rosenbaum, B. Ghersi, A.P. Mendoza, A. Perez-Brumer, N. Carvero, A. Westmark, M.R. Kasper, S. Montano, J. Zunt, A.K. Wilbur, L. Jones-Engel. (2014). Detection of Mycobacterium tuberculosis complex in captive nonhuman primates in Peru. EcoHealth. doi: 10.1007/s10393-014-0996-x

B.L. Malcolm. (2014). The spread process of epidemic influenza in the continental United States, 1968-2008. Spatialand Spatio-temporal Epidemiology, 8, 35-45. doi: 10.1016/j.sste.2014.01.001

N. Gay, K.J. Olival, S. Bumrungsri, B. Siriaroonrat, M. Bourgarel, S. Morand. (2014). Parasite and viral species richness of Southeast Asian bats: Fragmentation of area distribution matters. International Journal for Parasitology: Parasites and Wildlife, 3(2), 161-170. doi: 10.1016/j.ijppaw.2014.06.003

P.E. Reed, S. Mulangu, K.N. Cameron, A.U. Ondzie, D.O. Joly, M. Bermejo, P. Rouquet, G. Fabozzi, M. Bailey, Z. Shen, B.F. Keele, B. Hahn, W.B. Karesh, N.J. Sullivan. (2014). A new approach for monitoring ebolavirus in wild great apes. PLOS Neglected Tropical Diseases, 8(9), e3143. doi: 10.1371/journal.pntd.0003143

Q. Zhu, M. Kosoy, K. J. Olival, K. Dittmar. (2014). Horizontal transfers and gene losses in the phospholipid pathway of bartonella reveal clues about early ecological niches. Genome Biology and Evolution. doi: 10.1093/gbe/evu169

R. Limachi-Quinajo, R. Nallar-Gutierrez, E. Alandia-Robles. (2014). Gastrointestinal parasites in free-ranging tayassu pecari and pecari tajacu from the pilon lajas Biosphere Reserve and Indigenous Territory, Beni-Bolivia. Neotropical Helminthology, 8(2), 296-277. 

S.J. Anthony, M.M. Garner, L. Palminteri, I. Navarrete-Macias, M.D. Sanchez-Leon, T. Briese, P. Daszak P, W.I. Lipkin. (2014). West nile virus in the British Virgin Islands. EcoHealth, 11, 255-257. doi: 10.1007/s10393-014-0910-6

W. Liu, Y. Li, K. S. Shaw, G.H. Learn, L. Plenderleith, J.A. Malenke, S.A. Sundararaman, M.A. Ramirez, S. Locatelli, S. Ahuka-Mundeke, B-I Inogwabini, J-B N. Ndjango, i Speede, C.M. Sanz, D. B. Morgan, M.K. Gonder, Philip J. Kranzusch, P.D. Walsh, Alexander V. Georgiev, Alex K. Piel, F.A. Stewart, M. L. Wilson, A.E. Pusey, L. Cui, R. L. Culleton, A. Färnert, C.J. Sutherland, D. Nolder, A. Gillis, M. LeBreton, B.S. Schneider, N.D. Wolfe, A. Esteban, F. Mouacha, E. Mpoudi-Ngole, E. Delaporte, R. Carter, G.M. Shaw, J.C. Rayner, M. Peeters, P.M. Sharp, B.H. Hahn. (2014). African origin of the malaria parasite plasmodium vivax. Nature Communications, 5(3346). doi: 10.1038/ncomms4346

Zheng X, Mai W, Shu B, Yi L, Lu J, Song T, Zhong H, Xiao H, Guan D, Wu J, Liang L, Monagin C, Zhang X, Ke C. (2014). Mild influenza A/H7N9 infection among children in Guangdong province. Pediatric Infectious Disease Journal, 34(1). doi: 10.1097/INF.0000000000000492


D. Wu, Y Zhang, Q. ZhouHui, J. Kou, W. Liang, H. Zhang, C. Monagin, Q. Zhang, W. Li, H. Zhong, J. He, H. Li, S Cai, C. Ke, J. Lin. (2013). Chikungunya virus with E1-A226V mutation causing two outbreaks in 2010, Guangdong, China. Virology Journal, 10, 174. doi: 10.1186/1743-422X-10-174

G.V. Weaver, J. Domenech, A.R. Thiermann, W.B. Karesh. (2013). Foot and mouth disease: A look from the wild side. Journal of Wildlife Diseases, 49(4), 759-785. doi: 10.7589/2012-11-276

H. Xiao, D. Guan, R, Chen, P. Chen, C. Monagin, W. Li, J. Su, C. Ma, W. Zhang, C. Ke. (2013). Molecular characterization of echovirus 30-associated outbreak of aseptic meningitis in Guangdong 2012. Virology Journal, 10. doi: 10.1186/1743-422X-10-263

Iles JC, Abby Harrison GL, Lyons S, Djoko CF, Tamoufe U, Lebreton M, Schneider BS, Fair JN, Tshala FM, Kayembe PK, Muyembe JJ, Edidi-Basepeo S, Wolfe ND, Klenerman P, Simmonds P, Pybus OG. (2013). Hepatitis C virus infections in the Democratic Republic of Congo exhibit a cohort effect. Infection, Genetics & Evolution, 19, 386-394. doi: 10.1016/j.meegid.2013.01.021

J.L. Mokili, B.E. Dutilh, Y. Wei Lim, M.R. Haynes, B.S. Schneider, T. Taylor, D. Metzgar, C. Myers, P.J. Blair, B. Nosrat, N.D. Wolfe, F. Rohwer. (2013). Identification of a novel human papillomavirus by metagenomic analysis of samples from patients with febrile respiratory illness. PLOS One, 8(3), e58404. 

L. Spelman, K. Gilardi, M. Lukasik-Braum, J-F Kinani, E, Nyirakaragira, L. Lowenstine, M. Cranfield. (2013). Respiratory disease in mountain gorillas (gorilla beringei beringei) in Rwanda, 1990-2010: Outbreaks, clinical course, and medical management. Journal of Zoo and Wildlife Medicine, 44(4), 1027-1035. doi: 10.1638/2013-0014R.1

P. Mayor, C. Syles, J. Perez, M. Garci, E. Mamani, D. Montes, K. Long. (2013). High frequency of arbovirus exposure among wild animals in the North-eastern Peruvian Amazon. Journal of Veterinary Science, 114, 184-190. 

S.J. Anthony, J.A. St Leger, i. Navarrete-Macias, E. Nilson, M.D. Sanchez-Leon, E. Liang, T. Seimon, K. Jain, W. Karesh, P. Daszak, T. Briese, W.I. Lipkin. (2013). Identification of a novel cetacean polyomavirus from a common dolphin (Delphinus delphis) with tracheobronchitis. PLOS One, 8(7), e68239. 

S.L. Gardner, A.T. Dursahinham, G.R. Racz, N. Batsaikhan, S. Ganzorig, D.S. Tinnin, D. Damdinbarzar, C. Wood, A. Townsend Peterson, E. Alandia, J. Luis Mollericona, J. Salazar-Bravo. (2013). Sylvatic species of echinococcus from rodent intermediate hosts in Asia and South America. Occasional Papers, Museum of Texas Tech University, 318

T. Goldstein, I. Mena, S.J. Anthony, R. Medina, P.W. Robinson, D.J. Greig, D.P. Costa, W.I. Lipkin, A. Garcia-Sastre, W.M. Boyce. (2013). Pandemic H1N1 influenza isolated from free-ranging northern elephant seals in 2010 off the Central California Coast. PLOS One, 8(5), e62259. 

W. De, Z.Y Hui, Z.H. Qiong, K. Jing, L.W. Jia, Z. Huan, M. Corina, Zhang Ziao Li, Li Wen Jie, Zhong Hao Jie, He Jian Feng, Li Hui, Cai Song Wu, Ke ChangWen, Lin Jin Yan. (2013). Characterization of the Bas-Congo virus glycoprotein and its function in pseudotyped viruses. Journal of Virology, 87(17), 9558-9568. doi: 10.1128/JVI.01183-13

Z.A. Memish, N. Mishra, K.J. Olival, S.F. Fagbo, V. Kapoor, J.H. Epstein, R. AlHakeem, M. Al Asmari, A. Islam, A. Kapoor, T. Briese, P. Daszak, A.A. Al Rabeeah, W.I. Lipkin. (2013). Middle east respiratory syndrome coronavirus in bats, Saudi Arabia. Emerging Infectious Diseases, 19(11). doi:


Morse, S.S. (2012). Pandemics and peace: Public health cooperation in zones of conflict. Global Public Health. doi: 10.1080/17441692.2012.734841

S. Lyons, A. Kapoor, C. Sharp, B.S. Schneider, N.D. Wolfe, B. Corcoran, B. McGorum, P. Simmonds. (2012). Nonprimate hepaciviruses in domestic horses, United Kingdom. Emerging Infectious Diseases, 18(12). doi:

S.J. Anthony, J.A. St Leger, K. Pugliares, I. Hp, J. Chan, Z.W. Carpenter. I. Navarrete-Macias, M. Sanchez-Leon, J. Saliki, J. Pedersen, W. Karesh, P. Daszak, R. Rabadan, T. Rowles, W.L. Lipkin. (2012). Emergence of fatal avian influenza in new england harbor seals. mBio, 3(4). doi: 10.1128/mBio.00166-12

W.M. Switzer, S. Tang, S. Ahuka-Mundeke, A. Shankar, H. Zheng, A. Ayouba, N.D. Wolfe, M. LeBreton, C. Djoko, W. Heneine, M. Peeters, L.L. Wright, J-J Muyembe-Tamfum, E. Okitolonda Wemakoy, P. Mulembakani, A.W. Rimoin. (2012). Novel simian foamy virus infections from multiple monkey species in women from the Democratic Republic of Congo. Retrovirology, 9. doi: 10.1186/1742-4690-9-100

Wu De, Zheng Huanying, Li Hui, Monagin Corina, Guo Xue, Liu Leng, Zeng Hanri, Fang Ling, Mo Yanling, Zhou Huiqiong, Zhang Huan, Kou Jing, Long Caiyun, Hiromu Yoshida, Ke Changwen. (2012). Phylogenetic and molecular characterization of coxsackievirus A24 variant isolates from a 2010 acute hemorrhagic conjunctivitis outbreak in Guangdong, China. Virology Journal, 9(41). doi: 10.1186/1743-422X-9-41

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Books and book chapters


C. Machalaba, C. Romanelli, P. Stoett. 2017. Global Environmental Change and Emerging Infectious Diseases: Macrolevel Drivers and Policy Responses. In M.  Bouzid (Ed.), Exampling the Role of Environmental Change on Emerging Infectious Diseases and Pathogens (24-67). IGI Global. 


K.J. OIival, C.C. Weekely, P. Daszak. 2015. Anthropogenic Epidemics: The ecology of bat-borne viruses and our role in their emergence. In L.F. Wang and C. Cowled (Eds.), Bat Viruses: A New Frontier of Emerging Infectious Diseases (281-294). New Jersey: Wiley-Blackwell. 


T. Allen, K. Murray, K.J. Olival, P. Daszak. 2014. Eight critical questions for pandemic prediction. In Institute of Medicine (Eds.), The Influence of Global Environmental Change on Infectious Disease Dynamics: Workshop Summary (187-193). Washington, DC: The National Academies Press. doi:10.17226/18800


N.D. Preston, P. Daszak, R.R. Colwell. 2013. The Human Environment Interface: Applying Ecosystem Concepts to Health.  Current Topics in Microbiology and Immunology.

E. Loh, K.A. Murray, C. Zambrana-Torrelio, P.R. Hosseini, W.B. Karesh, P. Daszak. 2013. Ecological Approaches to Studying Zoonoses: Microbiology Spectrum.


K.J. Olival, J.H. Epstein, L.F. Wang, H.E. Field, P. Daszak. 2012. Are bats unique viral reservoirs? In A.A. Aguirre, R.S. Ostfeld & P. Daszak (Eds.), New Directions in Conservation Medicine: Applied Cases of Ecological Health (607). New York: Oxford University Press.

T. Bogich, P. Daszak, W.B. Karesh, J.A.K. Mazet, S.S. Morse, K. Jones, M. Levy, J.H. Epstein, K.J. Olival, P. Hosseini, S. Funk, I. Brito, D.  Joly, A.A. Aguirre, J. Brownstein. 2012. Using mathematical models in a unified approach to predicting the next emerging infectious disease. In A.A. Aguirre, R.S. Ostfeld & P. Daszak (Eds.), New Directions in Conservation Medicine: Applied Cases of Ecological Health (607). New York: Oxford University Press. 

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General Information

Field Sampling Guides

Qualitative Research Guides

  • Qualitative Research: Introduction & Observational Research Methods (English-pdf)
  • Qualitative Research: Focus Groups, Ethnographic Interviews, & Data Analysis (English-pdf)

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For more information, contact the PREDICT Project at